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Mac check cmake version6/18/2023 ![]() ![]() Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/sys/resource.h:236:2: error: unknown type name 'uint8_t' Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/sys/resource.h:216:2: error: unknown type name 'uint8_t' Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/sys/resource.h:202:2: error: unknown type name 'uint8_t' ![]() In file included from /Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/sys/wait.h:110: In file included from /Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/stdlib.h:66: Please find enclosed the config.log part where the error arise configure:16393: result: 0Ĭonfigure:16412: gcc -o conftest -O3 -fomit-frame-pointer -mtune=native -fstrict-aliasing conftest.c >&5 | # if !defined STDC_HEADERS & defined HAVE_MEMORY_H | #define PACKAGE_BUGREPORT “ #define PACKAGE_URL “” The first error associated to ‘size_t’ is:Ĭonfigure:16061: gcc -c -O3 -fomit-frame-pointer -mtune=native -fstrict-aliasing conftest.c >&5Ĭonftest.c:63:21: error: expected expression configure -prefix /Applications/fftw-3.3.10/fftw -enable-single -with-pic -disable-fortran -disable-mpi -disable-threads -enable-shared -disable-staticĬhecking whether time.h and sys/time.h may both be included… noĬhecking size of size_t… configure: error: in /Applications/fftw-3.3.10': configure: error: cannot compute sizeof (size_t) See config.log’ for more detailsĬlang: error: argument to ‘-V’ is missing (expected 1 value)Ĭlang: error: unknown argument '-qversion' did you mean '-version'?Ĭonfigure:4474: checking whether the C compiler works Indeed it gives the same error when trying to install separately.īut I do not understand the problem here too.įftw-3.3.10 %. InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/binĪny idea of what to do would be greatly appreciated. Make: *** Error 2Ĭonfigured with: -prefix=/Applications/Xcode.app/Contents/Developer/usr -with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/atform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1Īpple clang version 13.0.0 (clang-1300.0.29.3) Installation guide - GROMACS 2021.4 documentationĬhecking size of size_t… configure: error: in /Applications/gromacs-2021.4/build/src/external/build-fftw/fftwBuild-prefix/src/fftwBuild-build': configure: error: cannot compute sizeof (size_t) See config.log’ for more details Run make, make check, and make install.Run cmake with the path to the source as an argument.Make a separate build directory and change to it.Get and unpack the latest version of the GROMACS tarball.Check that you have CMake version 3.13 or later.Get the latest version of your C and C++ compilers. ![]()
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